Scientific Subcommittee: Annotation

High quality annotation is required to transform reference genome sequences into actionable knowledge. The annotation standards committee will propose standards for high-quality annotation of Phase I EBP genomes. These standards will include suggested input assembly quality, amounts of input annotation data such as long and short read transcriptome data from various library types and protein comparison data, multiple suggested software pipelines, and QC metrics to enable comparison of genomes annotated with different reproducible pipelines. The committee will also address the challenges of different taxa.

Members

Francoise Thibaud-Nissen, NCBI, United States, Co-Chair

Fergal Martin, EMBL-EBI, United Kingdom, Co-Chair

Alice Dennis, University of Namur, Belgium

Roderick Guigó, Centre for Genomic Regulation, Spain

Katharina Hoff, University of Greifswald, Germany

Qiye Li, BGI-Shenzhen, China

David Swarbreck, Earlham Institute, United Kingdom

Jill Wegrzyn, University of Connecticut, United States

Former Members

Qi Fang, BGI, China

Paul Flicek, EMBL-EBI Wellcome Genome Campus, United Kingdom

Paul Kersey, Royal Botanic Gardens, Kew, United Kingdom


Subcommittee standards

Read the Report on Annotation Standards for additional information.

Subcommittee Tool Recommendations

Read the Report on Annotation Tool Reccommendations for additional information.